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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Brast03G202100.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family | NAC | ||||||||
Protein Properties | Length: 267aa MW: 29387.5 Da PI: 4.4262 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 69.5 | 9.1e-22 | 9 | 148 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyat.gkrknr.atksgyWkatgkd 89 l pGf+F+P dee+v ++L +++ g+kl+le ++ e d +++ Pw+L + +++++e +fF+ + + ++r++r g W+ +g++ Brast03G202100.1.p 9 LSPGFKFNPDDEEIVEYFLLRRLLGQKLPLEVMFLEDDPLRAPPWKLL-RDHGRTDEAFFFAAGHAINGGcSRRQKRtCEGGGCWEGQGQK 98 579***************************7779999**********7.44456679999999888776437788884455899**99997 PP NAM 90 kevlskkgel.............vglkktLvfykgrapkgektdWvmheyrl 128 + +++l + k +L f+ ++++g +t Wvmhey + Brast03G202100.1.p 99 GRKDGDTSNLrfvdpesggameiEWKKYVLNFHI-DDEEG-STGWVMHEYVV 148 6655542222445555555566467777899994.55554.9********76 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.29E-25 | 3 | 153 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 22.963 | 9 | 168 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.3E-17 | 11 | 147 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 267 aa Download sequence Send to blast |
MEAADVLGLS PGFKFNPDDE EIVEYFLLRR LLGQKLPLEV MFLEDDPLRA PPWKLLRDHG 60 RTDEAFFFAA GHAINGGCSR RQKRTCEGGG CWEGQGQKGR KDGDTSNLRF VDPESGGAME 120 IEWKKYVLNF HIDDEEGSTG WVMHEYVVTA PAGLVSPTSI RAYRIRLGEH GKKRKREAED 180 PCGGDEEAAR AAARQARAEE PDLAVQEHIS GASQFGFPDQ DCEVVTDGDD QPLQVDSFEF 240 EGLYAPDNTS WFEPAAADLG SHSAAP* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010230095.1 | 5e-64 | PREDICTED: NAC domain-containing protein 83-like | ||||
TrEMBL | I1I691 | 1e-135 | I1I691_BRADI; Uncharacterized protein | ||||
STRING | BRADI3G33680.1 | 1e-135 | (Brachypodium distachyon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP802 | 22 | 137 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10490.1 | 6e-07 | NAC domain containing protein 52 |
Link Out ? help Back to Top | |
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Phytozome | Brast03G202100.1.p |